BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB015C11LP1|AL426826
(884 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1130 822 0.0
3x_Contig875 387 e-107
>3x_Contig1130
Length = 4826
Score = 822 bits (414), Expect = 0.0
Identities = 472/490 (96%), Gaps = 2/490 (0%)
Strand = Plus / Plus
Query: 397 ttaaagtttactgaaatggtctatccatattgtgatgggattggtattaattgtgggtgt 456
|||||||||| ||||||||| ||| ||||||||||||||||||||||||||||||||||
Sbjct: 42 ttaaagtttagtgaaatggtgtatggatattgtgatgggattggtattaattgtgggtgt 101
Query: 457 cccattcgtgaacaagttagggaaggtatcggttctgcgttgatttacaatggggaacta 516
||| ||||| |||||||||||||||| |||| || ||||||||| ||||||||| ||
Sbjct: 102 gggattggtgaagaagttagggaaggtatgggttgtgggttgatttagaatggggaagta 161
Query: 517 ttatgtgatatggtaaaagctgtcaaag-ataaatatagggactctgtaagattggagac 575
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 162 ttatgtgatatggtaaaagctgtcaaagcataaatatagggactctgtaagattggagac 221
Query: 576 taagatcagaattcacgacgatgttaaagacactgttaaattgtgcgatgatttatgcga 635
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 222 taagatcagaattcacgacgatgttaaagacactgttaaattgtgcgatgatttatgcga 281
Query: 636 as-tggtgtagattggataacagttcatggcagaacgagaacaacaagatcgtcggtacc 694
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 282 agctggtgtagattggataacagttcatggcagaacgagaacaacaagatcgtcggtacc 341
Query: 695 tgtaaacttagatgcaatcaaattcattagagagaacatgaaataccaggatgttccact 754
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 342 tgtaaacttagatgcaatcaaattcattagagagaacatgaaataccaggatgttccact 401
Query: 755 ggtagcaaacggagattgtttcactcttaatgattgctatcgtatatctgaatacacaaa 814
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 402 ggtagcaaacggagattgtttcactcttaatgattgctatcgtatatctgaatacacaaa 461
Query: 815 agttgatggcgttatggctgtgcgaggcttactatgcmatcctgcattattcgacggcta 874
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 462 agttgatggcgttatggctgtgcgaggcttactatgcaatcctgcattattcgacggcta 521
Query: 875 tgataagtgt 884
||||||||||
Sbjct: 522 tgataagtgt 531
>3x_Contig875
Length = 2795
Score = 387 bits (195), Expect = e-107
Identities = 195/195 (100%)
Strand = Plus / Minus
Query: 1 cttaaaatttttggtagcgtctctaaaagtactgaactgtcctttattatctctaaggtt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 195 cttaaaatttttggtagcgtctctaaaagtactgaactgtcctttattatctctaaggtt 136
Query: 61 tttccgggtcgcacaagagctctcggtaagatgtcattgtcagtgcagcttcctaccgct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 135 tttccgggtcgcacaagagctctcggtaagatgtcattgtcagtgcagcttcctaccgct 76
Query: 121 aagaagctaacaaaaaaaaatgatccattgcatattattaaaactagaagtcagacacac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 75 aagaagctaacaaaaaaaaatgatccattgcatattattaaaactagaagtcagacacac 16
Query: 181 tgcagaccagcgact 195
|||||||||||||||
Sbjct: 15 tgcagaccagcgact 1
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5576
Number of Sequences: 1807
Number of extensions: 5576
Number of successful extensions: 32
Number of sequences better than 1.0e-20: 2
length of query: 884
length of database: 10,358,551
effective HSP length: 16
effective length of query: 868
effective length of database: 10,329,639
effective search space: 8966126652
effective search space used: 8966126652
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)